HL_9MTR_026
3D structure
- PDB id
- 9MTR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with mRNA, A-site GGS-mutant Release Factor 1, and P-site fMEAAAKC-peptidyl-tRNAcys at 2.80A resolution
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.8 Å
Loop
- Sequence
- GGAACAAC
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9MTR_026 not in the Motif Atlas
- Geometric match to HL_9DFE_026
- Geometric discrepancy: 0.059
- The information below is about HL_9DFE_026
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_47171.1
- Basepair signature
- cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 10
Unit IDs
9MTR|1|1A|G|978
9MTR|1|1A|G|979
9MTR|1|1A|A|980
9MTR|1|1A|A|981
9MTR|1|1A|C|982
9MTR|1|1A|A|983
9MTR|1|1A|A|984
9MTR|1|1A|C|985
Current chains
- Chain 1A
- 23S Ribosomal RNA
Nearby chains
- Chain 13
- 50S ribosomal protein L30
- Chain 1B
- 5S ribosomal RNA; 5S rRNA
- Chain 1U
- 50S ribosomal protein L20
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