HL_9MTS_101
3D structure
- PDB id
- 9MTS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with mRNA, A-site Q230-unmodified Release Factor 1, and P-site fMEAAAKC-peptidyl-tRNAcys at 2.70A resolution
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.7 Å
Loop
- Sequence
- AAAGCGG(H2U)(H2U)AU
- Length
- 11 nucleotides
- Bulged bases
- 9MTS|1|1x|G|18, 9MTS|1|1x|G|19, 9MTS|1|1x|H2U|20, 9MTS|1|1x|H2U|21
- QA status
- Modified nucleotides: H2U
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_07480.2
- Basepair signature
- cWW-tSH-F-F-F
- Number of instances in this motif group
- 3
Unit IDs
9MTS|1|1x|A|12
9MTS|1|1x|A|13
9MTS|1|1x|A|14
9MTS|1|1x|G|15
9MTS|1|1x|C|16
9MTS|1|1x|G|18
9MTS|1|1x|G|19
9MTS|1|1x|H2U|20
9MTS|1|1x|H2U|21
9MTS|1|1x|A|22
9MTS|1|1x|U|23
Current chains
- Chain 1x
- P-site Peptidyl-tRNA fMEAAAKC-tRNAcys RNA-part
Nearby chains
- Chain 1A
- Large subunit ribosomal RNA; LSU rRNA
- Chain 1G
- 50S ribosomal protein L5
Coloring options: