HL_9MTS_147

3D structure

PDB id

9MTS (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with mRNA, A-site Q230-unmodified Release Factor 1, and P-site fMEAAAKC-peptidyl-tRNAcys at 2.70A resolution

Experimental method

X-RAY DIFFRACTION

Resolution

2.7 Å

Loop

Sequence

GGUAAGUUC

Length

9 nucleotides

Bulged bases

9MTS|1|2A|U|1955

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9MTS_147 not in the Motif Atlas

Geometric match to HL_5J7L_182

Geometric discrepancy: 0.0695

The information below is about HL_5J7L_182

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_20167.2

Basepair signature

cWW-F-F-F-F-F-F

Number of instances in this motif group

10

Unit IDs

9MTS|1|2A|G|1949
9MTS|1|2A|G|1950
9MTS|1|2A|U|1951
9MTS|1|2A|A|1952
9MTS|1|2A|A|1953
9MTS|1|2A|G|1954
9MTS|1|2A|U|1955
9MTS|1|2A|U|1956
9MTS|1|2A|C|1957

Current chains

Chain 2A

23S Ribosomal RNA

Nearby chains

Chain 2O

50S ribosomal protein L14

Chain 2a

Small subunit ribosomal RNA; SSU rRNA

Chain 2w

Peptide chain release factor 1