HL_9N6V_002

3D structure

PDB id

9N6V (explore in PDB, NAKB, or RNA 3D Hub)

Description

SSU processome maturation and disassembly, State A

Experimental method

ELECTRON MICROSCOPY

Resolution

3.16 Å

Loop

Sequence

CGUCAG

Length

6 nucleotides

Bulged bases

9N6V|1|L0|U|122

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9N6V_002 not in the Motif Atlas

Geometric match to HL_4LGT_001

Geometric discrepancy: 0.2103

The information below is about HL_4LGT_001

Detailed Annotation

UNCG

Broad Annotation

No text annotation

Motif group

HL_61337.3

Basepair signature

cWW-tSW-F

Number of instances in this motif group

62

Unit IDs

9N6V|1|L0|C|120
9N6V|1|L0|G|121
9N6V|1|L0|U|122
9N6V|1|L0|C|123
9N6V|1|L0|A|124
9N6V|1|L0|G|125

Current chains

Chain L0

5'ETS rRNA

Nearby chains

Chain SU

Nucleolar complex protein 4