HL_9N6Y_002

3D structure

PDB id

9N6Y (explore in PDB, NAKB, or RNA 3D Hub)

Description

SSU processome maturation and disassembly, State C

Experimental method

ELECTRON MICROSCOPY

Resolution

3.65 Å

Loop

Sequence

CGUCAG

Length

6 nucleotides

Bulged bases

9N6Y|1|L0|U|122

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9N6Y_002 not in the Motif Atlas

Geometric match to HL_2NUE_001

Geometric discrepancy: 0.2149

The information below is about HL_2NUE_001

Detailed Annotation

UNCG variation

Broad Annotation

UNCG variation

Motif group

HL_51020.2

Basepair signature

cWW-cSW-F

Number of instances in this motif group

14

Unit IDs

9N6Y|1|L0|C|120
9N6Y|1|L0|G|121
9N6Y|1|L0|U|122
9N6Y|1|L0|C|123
9N6Y|1|L0|A|124
9N6Y|1|L0|G|125

Current chains

Chain L0

5'ETS rRNA

Nearby chains

Chain SU

Nucleolar complex protein 4