HL_9N6Z_021

3D structure

PDB id

9N6Z (explore in PDB, NAKB, or RNA 3D Hub)

Description

SSU processome maturation and disassembly, State D

Experimental method

ELECTRON MICROSCOPY

Resolution

4.74 Å

Loop

Sequence

GGCAAC

Length

6 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9N6Z_021 not in the Motif Atlas

Geometric match to HL_9PN5_100

Geometric discrepancy: 0.1302

The information below is about HL_9PN5_100

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_34789.7

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

456

Unit IDs

9N6Z|1|L1|G|1698
9N6Z|1|L1|G|1699
9N6Z|1|L1|C|1700
9N6Z|1|L1|A|1701
9N6Z|1|L1|A|1702
9N6Z|1|L1|C|1703

Current chains

Chain L1

18S rRNA

Nearby chains

Chain NH

U3 small nucleolar RNA-associated protein 22