HL_9N70_004

3D structure

PDB id

9N70 (explore in PDB, NAKB, or RNA 3D Hub)

Description

SSU processome maturation and disassembly, State E

Experimental method

ELECTRON MICROSCOPY

Resolution

5.17 Å

Loop

Sequence

CUUUG

Length

5 nucleotides

Bulged bases

9N70|1|L1|U|193, 9N70|1|L1|U|194

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9N70_004 not in the Motif Atlas

Geometric match to HL_4V9F_003

Geometric discrepancy: 0.1362

The information below is about HL_4V9F_003

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75660.11

Basepair signature

cWW-F

Number of instances in this motif group

25

Unit IDs

9N70|1|L1|C|191
9N70|1|L1|U|192
9N70|1|L1|U|193
9N70|1|L1|U|194
9N70|1|L1|G|195

Current chains

Chain L1

18S rRNA

Nearby chains