HL_9N72_019

3D structure

PDB id

9N72 (explore in PDB, NAKB, or RNA 3D Hub)

Description

SSU processome maturation and disassembly, State F

Experimental method

ELECTRON MICROSCOPY

Resolution

5.94 Å

Loop

Sequence

UGAAACUUAAA

Length

11 nucleotides

Bulged bases

9N72|1|L1|A|1133, 9N72|1|L1|U|1135

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9N72|1|L1|U|1129
9N72|1|L1|G|1130
9N72|1|L1|A|1131
9N72|1|L1|A|1132
9N72|1|L1|A|1133
9N72|1|L1|C|1134
9N72|1|L1|U|1135
9N72|1|L1|U|1136
9N72|1|L1|A|1137
9N72|1|L1|A|1138
9N72|1|L1|A|1139

Current chains

Chain L1

18S rRNA

Nearby chains

Chain LQ

U3 small nucleolar RNA-associated protein 12

Chain SH

RNA 3'-terminal phosphate cyclase-like protein

Chain ST

Nucleolar complex protein 14