HL_9N72_022

3D structure

PDB id

9N72 (explore in PDB, NAKB, or RNA 3D Hub)

Description

SSU processome maturation and disassembly, State F

Experimental method

ELECTRON MICROSCOPY

Resolution

5.94 Å

Loop

Sequence

GUCAUCAGC

Length

9 nucleotides

Bulged bases

9N72|1|L1|U|1595, 9N72|1|L1|C|1596, 9N72|1|L1|G|1601

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9N72|1|L1|G|1594
9N72|1|L1|U|1595
9N72|1|L1|C|1596
9N72|1|L1|A|1597
9N72|1|L1|U|1598
9N72|1|L1|C|1599
9N72|1|L1|A|1600
9N72|1|L1|G|1601
9N72|1|L1|C|1602

Current chains

Chain L1

18S rRNA

Nearby chains

Chain NA

U3 small nucleolar RNA-associated protein MPP10

Chain NP

40S ribosomal protein S19-A

Chain SI

Ribosome biogenesis protein BMS1

Chain SM

U3 small nucleolar ribonucleoprotein protein IMP4