HL_9N75_001

3D structure

PDB id

9N75 (explore in PDB, NAKB, or RNA 3D Hub)

Description

SSU processome maturation and disassembly, State I

Experimental method

ELECTRON MICROSCOPY

Resolution

3.01 Å

Loop

Sequence

CGAAAG

Length

6 nucleotides

Bulged bases

9N75|1|L0|A|7

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9N75_001 not in the Motif Atlas

Geometric match to HL_8G9Z_003

Geometric discrepancy: 0.2867

The information below is about HL_8G9Z_003

Detailed Annotation

GNRA related

Broad Annotation

GNRA related

Motif group

HL_37569.3

Basepair signature

cWW-F-F-F

Number of instances in this motif group

9

Unit IDs

9N75|1|L0|C|4
9N75|1|L0|G|5
9N75|1|L0|A|6
9N75|1|L0|A|7
9N75|1|L0|A|8
9N75|1|L0|G|9

Current chains

Chain L0

5'ETS rRNA

Nearby chains

Chain LH

NET1-associated nuclear protein 1

Chain LI

U3 small nucleolar RNA-associated protein 8

Chain LK

U3 small nucleolar RNA-associated protein 9