HL_9N77_018
3D structure
- PDB id
- 9N77 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- SSU processome maturation and disassembly, State K
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.94 Å
Loop
- Sequence
- AGGUGAAAUU
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9N77_018 not in the Motif Atlas
- Homologous match to HL_9H3G_093
- Geometric discrepancy: 0.1894
- The information below is about HL_9H3G_093
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_38491.5
- Basepair signature
- cWW-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 16
Unit IDs
9N77|1|L1|A|900
9N77|1|L1|G|901
9N77|1|L1|G|902
9N77|1|L1|U|903
9N77|1|L1|G|904
9N77|1|L1|A|905
9N77|1|L1|A|906
9N77|1|L1|A|907
9N77|1|L1|U|908
9N77|1|L1|U|909
Current chains
- Chain L1
- 18S rRNA
Nearby chains
- Chain LR
- U3 small nucleolar RNA-associated protein 13
- Chain LT
- U3 small nucleolar RNA-associated protein 21
- Chain NG
- 40S ribosomal protein S14-A
- Chain NM
- Small ribosomal subunit protein eS1A
- Chain SW
- Pre-rRNA-processing protein PNO1
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