HL_9N9J_040

3D structure

PDB id

9N9J (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of a GRP94 folding intermediate engaged with a CCDC134- and FKBP11-bound secretory translocon

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

CGGUUCCGG

Length

9 nucleotides

Bulged bases

9N9J|1|L5|U|2707, 9N9J|1|L5|G|2711

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9N9J|1|L5|C|2704
9N9J|1|L5|G|2705
9N9J|1|L5|G|2706
9N9J|1|L5|U|2707
9N9J|1|L5|U|2708
9N9J|1|L5|C|2709
9N9J|1|L5|C|2710
9N9J|1|L5|G|2711
9N9J|1|L5|G|2712

Current chains

Chain L5

28S ribosomal RNA

Nearby chains

Chain D

Protein transport protein Sec61 subunit alpha isoform 1

Chain LR

Large ribosomal subunit protein eL19

Chain LU

Large ribosomal subunit protein eL22

Chain LX

Large ribosomal subunit protein uL23