HL_9N9J_073
3D structure
- PDB id
- 9N9J (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of a GRP94 folding intermediate engaged with a CCDC134- and FKBP11-bound secretory translocon
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- GUGAAUUGCAGGACACAUUGAUC
- Length
- 23 nucleotides
- Bulged bases
- 9N9J|1|L8|A|82, 9N9J|1|L8|A|84, 9N9J|1|L8|U|85, 9N9J|1|L8|U|86
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9N9J|1|L8|G|68
9N9J|1|L8|U|69
9N9J|1|L8|G|70
9N9J|1|L8|A|71
9N9J|1|L8|A|72
9N9J|1|L8|U|73
9N9J|1|L8|U|74
9N9J|1|L8|G|75
9N9J|1|L8|C|76
9N9J|1|L8|A|77
9N9J|1|L8|G|78
9N9J|1|L8|G|79
9N9J|1|L8|A|80
9N9J|1|L8|C|81
9N9J|1|L8|A|82
9N9J|1|L8|C|83
9N9J|1|L8|A|84
9N9J|1|L8|U|85
9N9J|1|L8|U|86
9N9J|1|L8|G|87
9N9J|1|L8|A|88
9N9J|1|L8|U|89
9N9J|1|L8|C|90
Current chains
- Chain L8
- 5.8S ribosomal RNA
Nearby chains
- Chain D
- Protein transport protein Sec61 subunit alpha isoform 1
- Chain F
- Protein transport protein Sec61 subunit gamma
- Chain J
- Oligosaccharyltransferase complex subunit OSTC
- Chain L5
- Large subunit ribosomal RNA; LSU rRNA
- Chain LY
- Large ribosomal subunit protein uL24
- Chain Lh
- Large ribosomal subunit protein uL29
- Chain Lj
- Large ribosomal subunit protein eL37
- Chain Ll
- Large ribosomal subunit protein eL39
- Chain N
- Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit KCP2
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