HL_9NDP_012

3D structure

PDB id

9NDP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of stalled ribosome and nascent chain in complex with NMT2 and NAC

Experimental method

ELECTRON MICROSCOPY

Resolution

2.82 Å

Loop

Sequence

GGUAAACUCC

Length

10 nucleotides

Bulged bases

9NDP|1|5|G|315, 9NDP|1|5|U|316

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9NDP|1|5|G|314
9NDP|1|5|G|315
9NDP|1|5|U|316
9NDP|1|5|A|317
9NDP|1|5|A|318
9NDP|1|5|A|319
9NDP|1|5|C|320
9NDP|1|5|U|321
9NDP|1|5|C|322
9NDP|1|5|C|323

Current chains

Chain 5

28S rRNA

Nearby chains

Chain L

eL13

Chain N

Ribosomal protein L15

Chain a

60S ribosomal protein L27a

Chain i

60S ribosomal protein L36

Chain o

Ribosomal protein L36a