9NDP Hairpin, Internal, and multi-helix Junction Loop Motifs
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| HL_9NDP_001 | 1/2/13:22 | tRNA D-loop | geometric HL_5AXM_001 HL_20490.1 | |
| HL_9NDP_002 | 1/2/30:40 | No text annotation | geometric HL_5IB8_208 HL_14063.2 | |
| HL_9NDP_003 | 1/2/53:61 | T-loop with 2 stacked bulged bases | geometric HL_6UGG_006 HL_33597.3 | |
| HL_9NDP_004 | 1/5/37:44 | No text annotation | ||
| HL_9NDP_005 | 1/5/68:73 | No text annotation | ||
| HL_9NDP_006 | 1/5/89:95 | No text annotation | ||
| HL_9NDP_007 | 1/5/131:137 | No text annotation | ||
| HL_9NDP_008 | 1/5/204:211 | No text annotation | ||
| HL_9NDP_009 | 1/5/222:226 | No text annotation | ||
| HL_9NDP_010 | 1/5/230:238 | No text annotation | ||
| HL_9NDP_011 | 1/5/289:298 | No text annotation | ||
| HL_9NDP_012 | 1/5/314:323 | No text annotation | ||
| HL_9NDP_013 | 1/5/368:373 | No text annotation | ||
| HL_9NDP_014 | 1/5/393:398 | No text annotation | ||
| HL_9NDP_018 | 1/5/1317:1326 | No text annotation | ||
| HL_9NDP_019 | 1/5/1364:1373 | No text annotation | ||
| HL_9NDP_020 | 1/5/1389:1394 | No text annotation | ||
| HL_9NDP_022 | 1/5/1479:1486 | No text annotation | ||
| HL_9NDP_023 | 1/5/1561:1566 | No text annotation | ||
| HL_9NDP_024 | 1/5/1593:1602 | No text annotation | ||
| HL_9NDP_025 | 1/5/1627:1635 | No text annotation | ||
| HL_9NDP_026 | 1/5/1675:1680 | No text annotation | ||
| HL_9NDP_028 | 1/5/1816:1823 | No text annotation | ||
| HL_9NDP_029 | 1/5/1864:1870 | No text annotation | ||
| HL_9NDP_030 | 1/5/1886:1893 | No text annotation | ||
| HL_9NDP_033 | 1/5/2087:2270 | No text annotation | ||
| HL_9NDP_034 | 1/5/2317:2322 | No text annotation | ||
| HL_9NDP_035 | 1/5/2376:2384 | No text annotation | ||
| HL_9NDP_036 | 1/5/2420:2426 | No text annotation | ||
| HL_9NDP_037 | 1/5/2458:2463 | No text annotation | ||
| HL_9NDP_039 | 1/5/2523:2532 | No text annotation | ||
| HL_9NDP_041 | 1/5/2578:2583 | No text annotation | ||
| HL_9NDP_042 | 1/5/2624:2632 | No text annotation | ||
| HL_9NDP_043 | 1/5/2664:2670 | No text annotation | ||
| HL_9NDP_044 | 1/5/2705:2710 | No text annotation | ||
| HL_9NDP_045 | 1/5/2738:2742 | No text annotation | ||
| HL_9NDP_046 | 1/5/2792:2799 | No text annotation | ||
| HL_9NDP_047 | 1/5/2810:2816 | No text annotation | ||
| HL_9NDP_048 | 1/5/2872:2877 | No text annotation | ||
| HL_9NDP_049 | 1/5/2901:3598 | No text annotation | ||
| HL_9NDP_050 | 1/5/3614:3618 | No text annotation | ||
| HL_9NDP_051 | 1/5/3639:3649 | No text annotation | ||
| HL_9NDP_052 | 1/5/3668:3674 | No text annotation | ||
| HL_9NDP_053 | 1/5/3724:3729 | No text annotation | ||
| HL_9NDP_054 | 1/5/3757:3767 | No text annotation | ||
| HL_9NDP_055 | 1/5/3796:3804 | No text annotation | ||
| HL_9NDP_056 | 1/5/3873:3882 | No text annotation | ||
| HL_9NDP_058 | 1/5/4193:4201 | No text annotation | ||
| HL_9NDP_059 | 1/5/4210:4222 | No text annotation | ||
| HL_9NDP_060 | 1/5/4250:4258 | No text annotation | ||
| HL_9NDP_061 | 1/5/4270:4277 | No text annotation | ||
| HL_9NDP_062 | 1/5/4301:4309 | No text annotation | ||
| HL_9NDP_063 | 1/5/4321:4326 | No text annotation | ||
| HL_9NDP_064 | 1/5/4352:4362 | No text annotation | ||
| HL_9NDP_065 | 1/5/4417:4425 | No text annotation | ||
| HL_9NDP_066 | 1/5/4474:4481 | No text annotation | ||
| HL_9NDP_067 | 1/5/4497:4503 | No text annotation | ||
| HL_9NDP_068 | 1/5/4540:4545 | No text annotation | ||
| HL_9NDP_069 | 1/5/4603:4608 | No text annotation | ||
| HL_9NDP_070 | 1/5/4646:4651 | No text annotation | ||
| HL_9NDP_071 | 1/5/4688:4702 | No text annotation | ||
| HL_9NDP_073 | 1/5/4906:4915 | No text annotation | ||
| HL_9NDP_074 | 1/5/4975:4983 | No text annotation | ||
| HL_9NDP_075 | 1/5/5021:5028 | No text annotation | ||
| HL_9NDP_076 | 1/7/32:45 | No text annotation | geometric HL_9AXU_068 HL_01182.1 | |
| HL_9NDP_077 | 1/7/36:41 | No text annotation | geometric HL_9AXU_069 HL_59381.2 | |
| HL_9NDP_078 | 1/7/86:91 | No text annotation | geometric HL_8QYX_073 HL_34789.4 | |
| HL_9NDP_079 | 1/8/47:56 | No text annotation | ||
| HL_9NDP_080 | 1/8/68:90 | No text annotation | ||
| HL_9NDP_081 | 1/8/107:112 | No text annotation | ||
| HL_9NDP_082 | 1/8/121:129 | No text annotation | ||
| HL_9NDP_083 | 1/K/7:17 | No text annotation | ||
| HL_9NDP_084 | 1/K/69:80 | No text annotation | ||
| HL_9NDP_085 | 1/K/156:162 | No text annotation | ||
| HL_9NDP_087 | 1/K/288:295 | No text annotation | ||
| HL_9NDP_089 | 1/K/377:387 | No text annotation | ||
| HL_9NDP_090 | 1/K/416:421 | No text annotation | ||
| HL_9NDP_091 | 1/K/441:452 | No text annotation | ||
| HL_9NDP_092 | 1/K/462:467 | No text annotation | ||
| HL_9NDP_093 | 1/K/498:504 | No text annotation | ||
| HL_9NDP_095 | 1/K/569:581 | No text annotation | ||
| HL_9NDP_096 | 1/K/618:623 | No text annotation | ||
| HL_9NDP_097 | 1/K/820:828 | No text annotation | ||
| HL_9NDP_098 | 1/K/833:841 | No text annotation | ||
| HL_9NDP_100 | 1/K/957:966 | No text annotation | ||
| HL_9NDP_101 | 1/K/994:999 | No text annotation | ||
| HL_9NDP_102 | 1/K/1054:1064 | No text annotation | ||
| HL_9NDP_104 | 1/K/1141:1146 | No text annotation | ||
| HL_9NDP_105 | 1/K/1178:1183 | No text annotation | ||
| HL_9NDP_106 | 1/K/1245:1254 | No text annotation | ||
| HL_9NDP_108 | 1/K/1353:1358 | No text annotation | ||
| HL_9NDP_109 | 1/K/1366:1373 | No text annotation | ||
| HL_9NDP_110 | 1/K/1416:1424 | No text annotation | ||
| HL_9NDP_111 | 1/K/1460:1466 | No text annotation | ||
| HL_9NDP_112 | 1/K/1565:1570 | No text annotation | ||
| HL_9NDP_113 | 1/K/1614:1625 | No text annotation | ||
| HL_9NDP_114 | 1/K/1658:1666 | No text annotation | ||
| HL_9NDP_116 | 1/K/1847:1852 | No text annotation |
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| HL_9NDP_015 | No text annotation | ||
| HL_9NDP_016 | No text annotation | ||
| HL_9NDP_017 | No text annotation | ||
| HL_9NDP_021 | No text annotation | ||
| HL_9NDP_027 | No text annotation | ||
| HL_9NDP_031 | No text annotation | ||
| HL_9NDP_032 | No text annotation | ||
| HL_9NDP_038 | No text annotation | ||
| HL_9NDP_040 | No text annotation | ||
| HL_9NDP_057 | No text annotation | ||
| HL_9NDP_072 | No text annotation | ||
| HL_9NDP_086 | No text annotation | ||
| HL_9NDP_088 | No text annotation | ||
| HL_9NDP_094 | No text annotation | ||
| HL_9NDP_099 | No text annotation | ||
| HL_9NDP_103 | No text annotation | ||
| HL_9NDP_107 | No text annotation | ||
| HL_9NDP_115 | No text annotation |
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| IL_9NDP_001 | 1/5/6:7, 1/8/149:151 | No text annotation | ||
| IL_9NDP_002 | 1/5/12:14, 1/8/143:144 | No text annotation | ||
| IL_9NDP_003 | 1/5/16:18, 1/8/139:141 | No text annotation | ||
| IL_9NDP_004 | 1/5/26:27, 1/5/55:57 | No text annotation | ||
| IL_9NDP_005 | 1/5/30:37, 1/5/44:52 | No text annotation | ||
| IL_9NDP_006 | 1/5/81:88, 1/5/96:102 | No text annotation | ||
| IL_9NDP_007 | 1/5/118:121, 1/5/152:153 | No text annotation | ||
| IL_9NDP_008 | 1/5/118:122, 1/5/147:153 | No text annotation | ||
| IL_9NDP_009 | 1/5/121:122, 1/5/147:152 | No text annotation | ||
| IL_9NDP_010 | 1/5/125:126, 1/5/142:144 | No text annotation | ||
| IL_9NDP_011 | 1/5/168:173, 1/5/263:267 | No text annotation | ||
| IL_9NDP_013 | 1/5/182:189, 1/5/252:255 | No text annotation | ||
| IL_9NDP_014 | 1/5/195:196, 1/5/244:246 | No text annotation | ||
| IL_9NDP_015 | 1/5/199:201, 1/5/214:215 | No text annotation | ||
| IL_9NDP_016 | 1/5/339:342, 1/8/32:33 | No text annotation | ||
| IL_9NDP_017 | 1/5/348:350, 1/8/25:26 | No text annotation | ||
| IL_9NDP_018 | 1/5/387:390, 1/5/401:414 | No text annotation | ||
| IL_9NDP_019 | 1/5/415:421, 1/8/13:19 | No text annotation | ||
| IL_9NDP_020 | 1/5/443:446, 1/5/1300:1304 | No text annotation | ||
| IL_9NDP_021 | 1/5/448:450, 1/5/1297:1298 | No text annotation | ||
| IL_9NDP_022 | 1/5/459:460, 1/5/695:697 | No text annotation | ||
| IL_9NDP_025 | 1/5/466:472, 1/5/682:689 | No text annotation | ||
| IL_9NDP_026 | 1/5/481:485, 1/5/671:673 | No text annotation | ||
| IL_9NDP_030 | 1/5/508:510, 1/5/649:650 | No text annotation | ||
| IL_9NDP_033 | 1/5/709:710, 1/5/1286:1288 | No text annotation | ||
| IL_9NDP_034 | 1/5/723:724, 1/5/942:945 | No text annotation | ||
| IL_9NDP_035 | 1/5/727:731, 1/5/938:939 | No text annotation | ||
| IL_9NDP_036 | 1/5/732:735, 1/5/928:937 | No text annotation | ||
| IL_9NDP_037 | 1/5/737:739, 1/5/923:926 | No text annotation | ||
| IL_9NDP_038 | 1/5/745:753, 1/5/910:919 | No text annotation | ||
| IL_9NDP_039 | 1/5/980:982, 1/5/1273:1275 | No text annotation | ||
| IL_9NDP_042 | 1/5/1082:1084, 1/5/1213:1217 | No text annotation | ||
| IL_9NDP_043 | 1/5/1086:1087, 1/5/1209:1211 | No text annotation | ||
| IL_9NDP_046 | 1/5/1173:1175, 1/5/1186:1188 | No text annotation | ||
| IL_9NDP_047 | 1/5/1357:1360, 1/5/1379:1382 | No text annotation | ||
| IL_9NDP_048 | 1/5/1357:1361, 1/5/1376:1382 | No text annotation | ||
| IL_9NDP_049 | 1/5/1360:1361, 1/5/1376:1379 | No text annotation | ||
| IL_9NDP_050 | 1/5/1425:1429, 1/5/1455:1460 | No text annotation | ||
| IL_9NDP_051 | 1/5/1431:1434, 1/5/1450:1453 | No text annotation | ||
| IL_9NDP_052 | 1/5/1467:1468, 1/5/1496:1498 | No text annotation | ||
| IL_9NDP_053 | 1/5/1474:1476, 1/5/1489:1490 | No text annotation | ||
| IL_9NDP_054 | 1/5/1520:1522, 1/5/1655:1657 | No text annotation | ||
| IL_9NDP_055 | 1/5/1522:1526, 1/5/1648:1655 | No text annotation | ||
| IL_9NDP_056 | 1/5/1550:1551, 1/5/1576:1578 | No text annotation | ||
| IL_9NDP_057 | 1/5/1551:1555, 1/5/1572:1576 | No text annotation | ||
| IL_9NDP_058 | 1/5/1586:1589, 1/5/1605:1607 | No text annotation | ||
| IL_9NDP_059 | 1/5/1590:1592, 1/5/1603:1604 | No text annotation | ||
| IL_9NDP_060 | 1/5/1624:1626, 1/5/1636:1640 | No text annotation | ||
| IL_9NDP_061 | 1/5/1671:1673, 1/5/1682:1684 | No text annotation | ||
| IL_9NDP_062 | 1/5/1686:1688, 1/5/1848:1851 | No text annotation | ||
| IL_9NDP_063 | 1/5/1694:1721, 1/5/1841:1842 | No text annotation | ||
| IL_9NDP_064 | 1/5/1723:1725, 1/5/1838:1839 | No text annotation | ||
| IL_9NDP_065 | 1/5/1732:1737, 1/5/1792:1797 | No text annotation | ||
| IL_9NDP_066 | 1/5/1737:1738, 1/5/1790:1792 | No text annotation | ||
| IL_9NDP_067 | 1/5/1739:1744, 1/5/1786:1789 | No text annotation | ||
| IL_9NDP_068 | 1/5/1746:1749, 1/5/1781:1784 | No text annotation | ||
| IL_9NDP_069 | 1/5/1749:1751, 1/5/1779:1781 | No text annotation | ||
| IL_9NDP_070 | 1/5/1753:1756, 1/5/1776:1777 | No text annotation | ||
| IL_9NDP_072 | 1/5/1814:1816, 1/5/1823:1824 | No text annotation | ||
| IL_9NDP_073 | 1/5/1858:1860, 1/5/1874:1876 | No text annotation | ||
| IL_9NDP_074 | 1/5/1905:1909, 1/5/2067:2071 | No text annotation | ||
| IL_9NDP_075 | 1/5/1911:1918, 1/5/2064:2065 | No text annotation | ||
| IL_9NDP_076 | 1/5/1918:1920, 1/5/2063:2064 | No text annotation | ||
| IL_9NDP_077 | 1/5/1920:1922, 1/5/2062:2063 | No text annotation | ||
| IL_9NDP_078 | 1/5/1926:1933, 1/5/2053:2058 | No text annotation | ||
| IL_9NDP_079 | 1/5/1933:1944, 1/5/2038:2053 | No text annotation | ||
| IL_9NDP_080 | 1/5/1946:1948, 1/5/2035:2036 | No text annotation | ||
| IL_9NDP_083 | 1/5/2083:2085, 1/5/2272:2273 | No text annotation | ||
| IL_9NDP_084 | 1/5/2290:2292, 1/5/2342:2345 | No text annotation | ||
| IL_9NDP_085 | 1/5/2299:2301, 1/5/2334:2335 | No text annotation | ||
| IL_9NDP_086 | 1/5/2302:2309, 1/5/2329:2333 | No text annotation | ||
| IL_9NDP_087 | 1/5/2312:2314, 1/5/2325:2326 | No text annotation | ||
| IL_9NDP_088 | 1/5/2358:2364, 1/5/3858:3863 | No text annotation | ||
| IL_9NDP_089 | 1/5/2415:2419, 1/5/2427:2429 | No text annotation | ||
| IL_9NDP_090 | 1/5/2446:2450, 1/5/2509:2514 | No text annotation | ||
| IL_9NDP_091 | 1/5/2477:2479, 1/5/2499:2500 | No text annotation | ||
| IL_9NDP_092 | 1/5/2542:2547, 1/5/2772:2774 | No text annotation | ||
| IL_9NDP_093 | 1/5/2549:2550, 1/5/2768:2770 | No text annotation | ||
| IL_9NDP_094 | 1/5/2589:2593, 1/5/2752:2756 | No text annotation | ||
| IL_9NDP_095 | 1/5/2613:2614, 1/5/2724:2726 | No text annotation | ||
| IL_9NDP_096 | 1/5/2614:2615, 1/5/2722:2724 | No text annotation | ||
| IL_9NDP_097 | 1/5/2646:2648, 1/5/2685:2688 | No text annotation | ||
| IL_9NDP_098 | 1/5/2651:2653, 1/5/2681:2682 | No text annotation | ||
| IL_9NDP_099 | 1/5/2656:2662, 1/5/2672:2678 | No text annotation | ||
| IL_9NDP_100 | 1/5/2704:2705, 1/5/2710:2712 | No text annotation | ||
| IL_9NDP_101 | 1/5/2832:2838, 1/5/3850:3853 | No text annotation | ||
| IL_9NDP_102 | 1/5/2844:2846, 1/5/3842:3844 | No text annotation | ||
| IL_9NDP_103 | 1/5/2847:2850, 1/5/3840:3841 | No text annotation | ||
| IL_9NDP_104 | 1/5/2847:2855, 1/5/3837:3841 | No text annotation | ||
| IL_9NDP_105 | 1/5/2850:2855, 1/5/3837:3840 | No text annotation | ||
| IL_9NDP_106 | 1/5/2867:2872, 1/5/2877:2883 | No text annotation | ||
| IL_9NDP_107 | 1/5/2889:2891, 1/5/3610:3612 | No text annotation | ||
| IL_9NDP_108 | 1/5/2896:2897, 1/5/3602:3605 | No text annotation | ||
| IL_9NDP_109 | 1/5/3632:3633, 1/5/3827:3829 | No text annotation | ||
| IL_9NDP_110 | 1/5/3660:3665, 1/5/3677:3684 | No text annotation | ||
| IL_9NDP_111 | 1/5/3700:3703, 1/5/3749:3750 | No text annotation | ||
| IL_9NDP_112 | 1/5/3704:3705, 1/5/3745:3748 | No text annotation | ||
| IL_9NDP_113 | 1/5/3708:3710, 1/5/3741:3742 | No text annotation | ||
| IL_9NDP_115 | 1/5/3715:3721, 1/5/3732:3738 | No text annotation | ||
| IL_9NDP_116 | 1/5/3780:3781, 1/5/3811:3814 | No text annotation | ||
| IL_9NDP_117 | 1/5/3781:3792, 1/5/3808:3811 | No text annotation | ||
| IL_9NDP_118 | 1/5/3895:3898, 1/5/4563:4565 | No text annotation | ||
| IL_9NDP_119 | 1/5/3900:3902, 1/5/4558:4561 | No text annotation | ||
| IL_9NDP_120 | 1/5/3913:3915, 1/5/4388:4389 | No text annotation | ||
| IL_9NDP_121 | 1/5/3916:3917, 1/5/4384:4387 | No text annotation | ||
| IL_9NDP_122 | 1/5/3927:3929, 1/5/4181:4184 | No text annotation | ||
| IL_9NDP_123 | 1/5/4082:4088, 1/5/4161:4164 | No text annotation | ||
| IL_9NDP_125 | 1/5/4191:4192, 1/5/4202:4204 | No text annotation | ||
| IL_9NDP_126 | 1/5/4243:4245, 1/5/4263:4267 | No text annotation | ||
| IL_9NDP_127 | 1/5/4291:4293, 1/5/4317:4318 | No text annotation | ||
| IL_9NDP_128 | 1/5/4295:4298, 1/5/4312:4315 | No text annotation | ||
| IL_9NDP_129 | 1/5/4347:4350, 1/5/4364:4365 | No text annotation | ||
| IL_9NDP_130 | 1/5/4400:4401, 1/5/4442:4444 | No text annotation | ||
| IL_9NDP_131 | 1/5/4401:4403, 1/5/4440:4442 | No text annotation | ||
| IL_9NDP_132 | 1/5/4403:4405, 1/5/4439:4440 | No text annotation | ||
| IL_9NDP_133 | 1/5/4405:4407, 1/5/4435:4439 | No text annotation | ||
| IL_9NDP_134 | 1/5/4412:4416, 1/5/4426:4430 | No text annotation | ||
| IL_9NDP_135 | 1/5/4453:4454, 1/5/4526:4528 | No text annotation | ||
| IL_9NDP_136 | 1/5/4456:4458, 1/5/4520:4524 | No text annotation | ||
| IL_9NDP_137 | 1/5/4458:4459, 1/5/4517:4520 | No text annotation | ||
| IL_9NDP_138 | 1/5/4466:4468, 1/5/4489:4491 | No text annotation | ||
| IL_9NDP_139 | 1/5/4466:4470, 1/5/4485:4491 | No text annotation | ||
| IL_9NDP_140 | 1/5/4468:4470, 1/5/4485:4489 | No text annotation | ||
| IL_9NDP_141 | 1/5/4495:4497, 1/5/4503:4505 | No text annotation | ||
| IL_9NDP_142 | 1/5/4537:4538, 1/5/4547:4549 | No text annotation | ||
| IL_9NDP_143 | 1/5/4580:4582, 1/5/4721:4723 | No text annotation | ||
| IL_9NDP_144 | 1/5/4582:4585, 1/5/4717:4721 | No text annotation | ||
| IL_9NDP_145 | 1/5/4590:4592, 1/5/4618:4620 | No text annotation | ||
| IL_9NDP_146 | 1/5/4596:4603, 1/5/4608:4614 | No text annotation | ||
| IL_9NDP_147 | 1/5/4624:4629, 1/5/4669:4673 | No text annotation | ||
| IL_9NDP_148 | 1/5/4632:4637, 1/5/4662:4666 | No text annotation | ||
| IL_9NDP_149 | 1/5/4638:4640, 1/5/4659:4661 | No text annotation | ||
| IL_9NDP_150 | 1/5/4641:4642, 1/5/4655:4658 | No text annotation | ||
| IL_9NDP_151 | 1/5/4680:4685, 1/5/4705:4710 | No text annotation | ||
| IL_9NDP_152 | 1/5/4739:4747, 1/5/4953:4960 | No text annotation | ||
| IL_9NDP_153 | 1/5/4756:4766, 1/5/4868:4877 | No text annotation | ||
| IL_9NDP_154 | 1/5/4769:4773, 1/5/4862:4865 | No text annotation | ||
| IL_9NDP_155 | 1/5/4885:4888, 1/5/4931:4934 | No text annotation | ||
| IL_9NDP_156 | 1/5/4890:4896, 1/5/4924:4929 | No text annotation | ||
| IL_9NDP_158 | 1/5/4972:4975, 1/5/4983:4986 | No text annotation | ||
| IL_9NDP_159 | 1/5/4992:4994, 1/5/5057:5059 | No text annotation | ||
| IL_9NDP_160 | 1/5/4996:4997, 1/5/5053:5055 | No text annotation | ||
| IL_9NDP_161 | 1/5/5000:5002, 1/5/5045:5050 | No text annotation | ||
| IL_9NDP_162 | 1/5/5003:5009, 1/5/5039:5044 | No text annotation | ||
| IL_9NDP_163 | 1/5/5012:5014, 1/5/5035:5036 | No text annotation | ||
| IL_9NDP_164 | 1/5/5014:5017, 1/5/5032:5035 | No text annotation | ||
| IL_9NDP_165 | 1/7/15:16, 1/7/62:64 | No text annotation | geometric IL_8QYX_165 IL_05642.2 | |
| IL_9NDP_166 | 1/7/21:27, 1/7/52:57 | No text annotation | geometric IL_8QYX_166 IL_41504.1 | |
| IL_9NDP_167 | 1/7/28:29, 1/7/48:51 | No text annotation | geometric IL_8QYX_167 IL_73108.2 | |
| IL_9NDP_168 | 1/7/32:36, 1/7/41:45 | No text annotation | geometric IL_8QYX_168 IL_58103.12 | |
| IL_9NDP_169 | 1/7/71:78, 1/7/98:104 | No text annotation | geometric IL_8QYX_169 IL_62167.3 | |
| IL_9NDP_170 | 1/7/79:81, 1/7/95:97 | No text annotation | geometric IL_8QYX_170 IL_71625.3 | |
| IL_9NDP_171 | 1/7/82:85, 1/7/92:94 | No text annotation | geometric IL_8QYX_171 IL_01003.3 | |
| IL_9NDP_172 | 1/8/64:66, 1/8/92:95 | No text annotation | ||
| IL_9NDP_173 | 1/K/23:25, 1/K/649:651 | No text annotation | ||
| IL_9NDP_174 | 1/K/34:36, 1/K/519:521 | No text annotation | ||
| IL_9NDP_175 | 1/K/37:40, 1/K/514:518 | No text annotation | ||
| IL_9NDP_176 | 1/K/41:47, 1/K/479:481 | No text annotation | ||
| IL_9NDP_177 | 1/K/49:51, 1/K/476:477 | No text annotation | ||
| IL_9NDP_178 | 1/K/57:62, 1/K/86:88 | No text annotation | ||
| IL_9NDP_179 | 1/K/63:68, 1/K/81:85 | No text annotation | ||
| IL_9NDP_180 | 1/K/108:110, 1/K/351:353 | No text annotation | ||
| IL_9NDP_181 | 1/K/110:112, 1/K/349:351 | No text annotation | ||
| IL_9NDP_182 | 1/K/112:115, 1/K/348:349 | No text annotation | ||
| IL_9NDP_183 | 1/K/116:121, 1/K/343:347 | No text annotation | ||
| IL_9NDP_184 | 1/K/130:144, 1/K/175:182 | No text annotation | ||
| IL_9NDP_185 | 1/K/145:151, 1/K/167:174 | No text annotation | ||
| IL_9NDP_186 | 1/K/152:155, 1/K/163:166 | No text annotation | ||
| IL_9NDP_188 | 1/K/216:219, 1/K/302:309 | No text annotation | ||
| IL_9NDP_189 | 1/K/223:288, 1/K/295:298 | No text annotation | ||
| IL_9NDP_190 | 1/K/312:314, 1/K/336:337 | No text annotation | ||
| IL_9NDP_191 | 1/K/317:320, 1/K/331:333 | No text annotation | ||
| IL_9NDP_192 | 1/K/359:364, 1/K/396:403 | No text annotation | ||
| IL_9NDP_193 | 1/K/366:371, 1/K/393:394 | No text annotation | ||
| IL_9NDP_194 | 1/K/411:413, 1/K/424:429 | No text annotation | ||
| IL_9NDP_195 | 1/K/437:439, 1/K/454:456 | No text annotation | ||
| IL_9NDP_196 | 1/K/459:461, 1/K/468:470 | No text annotation | ||
| IL_9NDP_197 | 1/K/487:489, 1/K/511:512 | No text annotation | ||
| IL_9NDP_198 | 1/K/491:495, 1/K/508:509 | No text annotation | ||
| IL_9NDP_199 | 1/K/495:496, 1/K/506:508 | No text annotation | ||
| IL_9NDP_202 | 1/K/563:565, 1/K/585:592 | No text annotation | ||
| IL_9NDP_203 | 1/K/566:569, 1/K/581:584 | No text annotation | ||
| IL_9NDP_204 | 1/K/599:608, 1/K/635:637 | No text annotation | ||
| IL_9NDP_205 | 1/K/611:617, 1/K/624:632 | No text annotation | ||
| IL_9NDP_206 | 1/K/663:665, 1/K/1162:1164 | No text annotation | ||
| IL_9NDP_207 | 1/K/665:671, 1/K/1161:1162 | No text annotation | ||
| IL_9NDP_208 | 1/K/673:675, 1/K/1030:1032 | No text annotation | ||
| IL_9NDP_209 | 1/K/676:680, 1/K/1025:1029 | No text annotation | ||
| IL_9NDP_213 | 1/K/802:803, 1/K/860:863 | No text annotation | ||
| IL_9NDP_214 | 1/K/805:807, 1/K/856:858 | No text annotation | ||
| IL_9NDP_215 | 1/K/807:815, 1/K/849:856 | No text annotation | ||
| IL_9NDP_216 | 1/K/874:876, 1/K/910:912 | No text annotation | ||
| IL_9NDP_217 | 1/K/877:879, 1/K/907:909 | No text annotation | ||
| IL_9NDP_218 | 1/K/922:923, 1/K/1019:1022 | No text annotation | ||
| IL_9NDP_219 | 1/K/925:926, 1/K/1015:1017 | No text annotation | ||
| IL_9NDP_220 | 1/K/928:931, 1/K/1010:1013 | No text annotation | ||
| IL_9NDP_221 | 1/K/931:935, 1/K/1007:1010 | No text annotation | ||
| IL_9NDP_222 | 1/K/943:945, 1/K/981:983 | No text annotation | ||
| IL_9NDP_223 | 1/K/952:956, 1/K/967:974 | No text annotation | ||
| IL_9NDP_224 | 1/K/1042:1047, 1/K/1071:1073 | No text annotation | ||
| IL_9NDP_225 | 1/K/1047:1051, 1/K/1067:1071 | No text annotation | ||
| IL_9NDP_226 | 1/K/1091:1093, 1/K/1152:1158 | No text annotation | ||
| IL_9NDP_227 | 1/K/1098:1101, 1/K/1131:1134 | No text annotation | ||
| IL_9NDP_228 | 1/K/1101:1103, 1/K/1129:1131 | No text annotation | ||
| IL_9NDP_229 | 1/K/1108:1110, 1/K/1123:1124 | No text annotation | ||
| IL_9NDP_230 | 1/K/1168:1175, 1/K/1186:1191 | No text annotation | ||
| IL_9NDP_231 | 1/K/1203:1204, 1/K/1694:1696 | No text annotation | ||
| IL_9NDP_232 | 1/K/1206:1208, 1/K/1691:1692 | No text annotation | ||
| IL_9NDP_233 | 1/K/1214:1217, 1/K/1681:1685 | No text annotation | ||
| IL_9NDP_234 | 1/K/1230:1232, 1/K/1526:1528 | No text annotation | ||
| IL_9NDP_235 | 1/K/1235:1236, 1/K/1521:1523 | No text annotation | ||
| IL_9NDP_236 | 1/K/1270:1272, 1/K/1510:1512 | No text annotation | ||
| IL_9NDP_239 | 1/K/1325:1327, 1/K/1502:1503 | No text annotation | ||
| IL_9NDP_240 | 1/K/1329:1333, 1/K/1498:1500 | No text annotation | ||
| IL_9NDP_241 | 1/K/1329:1335, 1/K/1492:1500 | No text annotation | ||
| IL_9NDP_242 | 1/K/1333:1335, 1/K/1492:1498 | No text annotation | ||
| IL_9NDP_243 | 1/K/1337:1338, 1/K/1488:1490 | No text annotation | ||
| IL_9NDP_244 | 1/K/1347:1349, 1/K/1380:1382 | No text annotation | ||
| IL_9NDP_245 | 1/K/1363:1365, 1/K/1374:1375 | No text annotation | ||
| IL_9NDP_246 | 1/K/1395:1399, 1/K/1447:1450 | No text annotation | ||
| IL_9NDP_247 | 1/K/1402:1405, 1/K/1441:1444 | No text annotation | ||
| IL_9NDP_248 | 1/K/1412:1413, 1/K/1427:1429 | No text annotation | ||
| IL_9NDP_249 | 1/K/1537:1539, 1/K/1594:1596 | No text annotation | ||
| IL_9NDP_250 | 1/K/1541:1550, 1/K/1582:1592 | No text annotation | ||
| IL_9NDP_251 | 1/K/1550:1558, 1/K/1577:1582 | No text annotation | ||
| IL_9NDP_252 | 1/K/1560:1562, 1/K/1573:1575 | No text annotation | ||
| IL_9NDP_253 | 1/K/1604:1610, 1/K/1629:1635 | No text annotation | ||
| IL_9NDP_254 | 1/K/1700:1702, 1/K/1833:1836 | No text annotation | ||
| IL_9NDP_255 | 1/K/1702:1705, 1/K/1829:1833 | No text annotation | ||
| IL_9NDP_256 | 1/K/1706:1708, 1/K/1826:1828 | No text annotation | ||
| IL_9NDP_257 | 1/K/1708:1711, 1/K/1822:1826 | No text annotation | ||
| IL_9NDP_258 | 1/K/1714:1716, 1/K/1817:1819 | No text annotation | ||
| IL_9NDP_259 | 1/K/1717:1720, 1/K/1813:1816 | No text annotation | ||
| IL_9NDP_260 | 1/K/1720:1722, 1/K/1812:1813 | No text annotation | ||
| IL_9NDP_261 | 1/K/1729:1731, 1/K/1803:1805 | No text annotation | ||
| IL_9NDP_262 | 1/K/1733:1736, 1/K/1798:1801 | No text annotation | ||
| IL_9NDP_263 | 1/K/1739:1741, 1/K/1793:1795 | No text annotation | ||
| IL_9NDP_264 | 1/K/1742:1746, 1/K/1788:1792 | No text annotation |
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| IL_9NDP_012 | No text annotation | ||
| IL_9NDP_023 | No text annotation | ||
| IL_9NDP_024 | No text annotation | ||
| IL_9NDP_027 | No text annotation | ||
| IL_9NDP_028 | No text annotation | ||
| IL_9NDP_029 | No text annotation | ||
| IL_9NDP_031 | No text annotation | ||
| IL_9NDP_032 | No text annotation | ||
| IL_9NDP_040 | No text annotation | ||
| IL_9NDP_041 | No text annotation | ||
| IL_9NDP_044 | No text annotation | ||
| IL_9NDP_045 | No text annotation | ||
| IL_9NDP_071 | No text annotation | ||
| IL_9NDP_081 | No text annotation | ||
| IL_9NDP_082 | No text annotation | ||
| IL_9NDP_114 | No text annotation | ||
| IL_9NDP_124 | No text annotation | ||
| IL_9NDP_157 | No text annotation | ||
| IL_9NDP_187 | No text annotation | ||
| IL_9NDP_200 | No text annotation | ||
| IL_9NDP_201 | No text annotation | ||
| IL_9NDP_210 | No text annotation | ||
| IL_9NDP_211 | No text annotation | ||
| IL_9NDP_212 | No text annotation | ||
| IL_9NDP_237 | No text annotation | ||
| IL_9NDP_238 | No text annotation | ||
| IL_9NDP_265 | No text annotation | ||
| IL_9NDP_266 | No text annotation |
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| J3_9NDP_001 | 1/5/112:116, 1/5/155:160, 1/5/275:278 | No text annotation | ||
| J3_9NDP_002 | 1/5/196:199, 1/5/215:228, 1/5/240:244 | No text annotation | ||
| J3_9NDP_003 | 1/5/351:367, 1/5/374:379, 1/8/21:24 | No text annotation | ||
| J3_9NDP_004 | 1/5/380:387, 1/5/414:415, 1/8/19:20 | No text annotation | ||
| J3_9NDP_005 | 1/5/380:390, 1/5/401:415, 1/8/19:20 | No text annotation | ||
| J3_9NDP_006 | 1/5/451:455, 1/5/701:705, 1/5/1292:1296 | No text annotation | ||
| J3_9NDP_007 | 1/5/982:984, 1/5/1070:1075, 1/5/1236:1273 | No text annotation | ||
| J3_9NDP_008 | 1/5/1531:1537, 1/5/1622:1624, 1/5/1640:1643 | No text annotation | ||
| J3_9NDP_009 | 1/5/1545:1548, 1/5/1580:1584, 1/5/1609:1614 | No text annotation | ||
| J3_9NDP_010 | 1/5/1726:1727, 1/5/1802:1806, 1/5/1832:1837 | No text annotation | ||
| J3_9NDP_012 | 1/5/2393:2399, 1/5/2805:2807, 1/5/2819:2822 | No text annotation | ||
| J3_9NDP_013 | 1/5/2402:2405, 1/5/2785:2791, 1/5/2800:2802 | No text annotation | ||
| J3_9NDP_014 | 1/5/2440:2445, 1/5/2515:2519, 1/5/2536:2537 | No text annotation | ||
| J3_9NDP_015 | 1/5/2451:2456, 1/5/2465:2476, 1/5/2501:2508 | No text annotation | ||
| J3_9NDP_016 | 1/5/2598:2602, 1/5/2737:2738, 1/5/2742:2747 | No text annotation | ||
| J3_9NDP_017 | 1/5/3937:3939, 1/5/4074:4078, 1/5/4168:4173 | No text annotation | ||
| J3_9NDP_018 | 1/5/4091:4094, 1/5/4114:4129, 1/5/4155:4158 | No text annotation | ||
| J3_9NDP_019 | 1/5/4228:4230, 1/5/4331:4342, 1/5/4370:4375 | No text annotation | ||
| J3_9NDP_020 | 1/5/4241:4243, 1/5/4267:4269, 1/5/4278:4283 | No text annotation | ||
| J3_9NDP_021 | 1/5/4463:4466, 1/5/4491:4493, 1/5/4507:4513 | No text annotation | ||
| J3_9NDP_022 | 1/5/4749:4754, 1/5/4879:4883, 1/5/4936:4951 | No text annotation | ||
| J3_9NDP_023 | 1/5/4970:4972, 1/5/4986:4991, 1/5/5060:5063 | No text annotation | ||
| J3_9NDP_024 | 1/7/9:14, 1/7/65:66, 1/7/109:110 | No text annotation | geometric J3_8QYX_024 J3_26985.1 | |
| J3_9NDP_025 | 1/8/44:45, 1/8/58:64, 1/8/95:99 | No text annotation | ||
| J3_9NDP_026 | 1/K/40:41, 1/K/481:487, 1/K/512:514 | No text annotation | ||
| J3_9NDP_027 | 1/K/682:684, 1/K/918:922, 1/K/1022:1023 | No text annotation | ||
| J3_9NDP_028 | 1/K/682:684, 1/K/918:923, 1/K/1019:1023 | No text annotation | ||
| J3_9NDP_029 | 1/K/816:819, 1/K/829:831, 1/K/843:848 | No text annotation | ||
| J3_9NDP_030 | 1/K/938:941, 1/K/985:993, 1/K/1000:1004 | No text annotation | ||
| J3_9NDP_031 | 1/K/1094:1096, 1/K/1136:1140, 1/K/1147:1151 | No text annotation | ||
| J3_9NDP_032 | 1/K/1218:1221, 1/K/1645:1651, 1/K/1673:1680 | No text annotation | ||
| J3_9NDP_033 | 1/K/1225:1228, 1/K/1530:1532, 1/K/1638:1641 | No text annotation | ||
| J3_9NDP_034 | 1/K/1237:1244, 1/K/1255:1266, 1/K/1516:1520 | No text annotation | ||
| J3_9NDP_035 | 1/K/1272:1277, 1/K/1320:1324, 1/K/1504:1510 | No text annotation | ||
| J3_9NDP_036 | 1/K/1340:1345, 1/K/1384:1389, 1/K/1481:1486 | No text annotation | ||
| J3_9NDP_037 | 1/K/1350:1351, 1/K/1360:1363, 1/K/1375:1379 | No text annotation | ||
| J3_9NDP_038 | 1/K/1391:1395, 1/K/1450:1456, 1/K/1470:1479 | No text annotation | ||
| J3_9NDP_039 | 1/K/1532:1536, 1/K/1597:1604, 1/K/1635:1638 | No text annotation | ||
| J4_9NDP_001 | 1/2/7:10, 1/2/25:27, 1/2/43:51, 1/2/63:66 | No text annotation | ||
| J4_9NDP_002 | 1/5/111:112, 1/5/278:283, 1/5/304:310, 1/5/327:330 | No text annotation | ||
| J4_9NDP_003 | 1/5/196:199, 1/5/215:222, 1/5/226:228, 1/5/240:244 | No text annotation | ||
| J4_9NDP_004 | 1/5/712:713, 1/5/955:961, 1/5/971:980, 1/5/1275:1284 | No text annotation | ||
| J4_9NDP_005 | 1/5/2365:2371, 1/5/2389:2391, 1/5/2824:2829, 1/5/3856:3857 | No text annotation | ||
| J4_9NDP_006 | 1/5/2406:2410, 1/5/2434:2439, 1/5/2538:2539, 1/5/2777:2784 | No text annotation | ||
| J4_9NDP_007 | 1/5/2551:2555, 1/5/2572:2576, 1/5/2585:2589, 1/5/2756:2767 | No text annotation | ||
| J4_9NDP_008 | 1/5/2618:2619, 1/5/2637:2642, 1/5/2692:2698, 1/5/2718:2719 | No text annotation | ||
| J4_9NDP_009 | 1/5/3634:3638, 1/5/3650:3654, 1/5/3690:3694, 1/5/3821:3826 | No text annotation | ||
| J4_9NDP_010 | 1/5/3696:3698, 1/5/3752:3753, 1/5/3771:3780, 1/5/3814:3819 | No text annotation | ||
| J4_9NDP_011 | 1/5/4231:4235, 1/5/4289:4291, 1/5/4318:4319, 1/5/4328:4330 | No text annotation | ||
| J4_9NDP_012 | 1/5/4587:4590, 1/5/4620:4621, 1/5/4676:4678, 1/5/4712:4715 | No text annotation | ||
| J4_9NDP_013 | 1/K/98:106, 1/K/355:357, 1/K/405:409, 1/K/431:432 | No text annotation | ||
| J4_9NDP_014 | 1/K/671:673, 1/K/1032:1037, 1/K/1078:1089, 1/K/1160:1161 | No text annotation | ||
| J5_9NDP_001 | 1/5/20:21, 1/8/35:42, 1/8/101:106, 1/8/113:114, 1/8/136:137 | No text annotation | ||
| J5_9NDP_002 | 1/5/1335:1340, 1/5/1516:1519, 1/5/1658:1661, 1/5/2288:2290, 1/5/2345:2351 | No text annotation | ||
| J5_9NDP_003 | 1/5/2855:2863, 1/5/2887:2888, 1/5/3613:3614, 1/5/3618:3626, 1/5/3835:3837 | No text annotation | ||
| J5_9NDP_004 | 1/5/3903:3910, 1/5/4392:4400, 1/5/4444:4453, 1/5/4528:4534, 1/5/4552:4557 | No text annotation | ||
| J5_9NDP_005 | 1/5/3920:3923, 1/5/4188:4191, 1/5/4204:4205, 1/5/4227:4228, 1/5/4375:4381 | No text annotation | ||
| J5_9NDP_006 | 1/K/30:34, 1/K/521:527, 1/K/558:563, 1/K/592:595, 1/K/641:644 | No text annotation | ||
| J5_9NDP_007 | 1/K/30:34, 1/K/521:527, 1/K/558:565, 1/K/585:595, 1/K/641:644 | No text annotation | ||
| J5_9NDP_008 | 1/K/53:56, 1/K/89:96, 1/K/434:436, 1/K/457:459, 1/K/470:474 | No text annotation | ||
| J5_9NDP_009 | 1/K/123:129, 1/K/183:185, 1/K/214:215, 1/K/310:312, 1/K/337:341 | No text annotation | ||
| J5_9NDP_010 | 1/K/685:690, 1/K/736:744, 1/K/797:800, 1/K/865:874, 1/K/912:917 | No text annotation | ||
| J6_9NDP_001 | 1/5/21:26, 1/5/57:67, 1/5/74:78, 1/5/105:109, 1/5/332:339, 1/8/33:35 | No text annotation | ||
| J6_9NDP_002 | 1/5/1352:1355, 1/5/1384:1388, 1/5/1395:1399, 1/5/1418:1421, 1/5/1464:1466, 1/5/1499:1504 | No text annotation | ||
| J6_9NDP_003 | 1/5/3920:3923, 1/5/4188:4191, 1/5/4204:4205, 1/5/4227:4230, 1/5/4331:4342, 1/5/4370:4381 | No text annotation | ||
| J7_9NDP_001 | 1/5/1666:1671, 1/5/1684:1685, 1/5/1852:1855, 1/5/1879:1884, 1/5/1895:1899, 1/5/2077:2078, 1/5/2278:2283 | No text annotation |
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| J3_9NDP_011 | No text annotation |
Coloring options: