HL_9NDP_013
3D structure
- PDB id
- 9NDP (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of stalled ribosome and nascent chain in complex with NMT2 and NAC
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.82 Å
Loop
- Sequence
- CGUAAG
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9NDP_013 not in the Motif Atlas
- Homologous match to HL_8GLP_010
- Geometric discrepancy: 0.1092
- The information below is about HL_8GLP_010
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_34789.6
- Basepair signature
- cWW-F-F-F-F
- Number of instances in this motif group
- 434
Unit IDs
9NDP|1|5|C|368
9NDP|1|5|G|369
9NDP|1|5|U|370
9NDP|1|5|A|371
9NDP|1|5|A|372
9NDP|1|5|G|373
Current chains
- Chain 5
- 28S rRNA
Nearby chains
- Chain C
- 60S ribosomal protein L4
- Chain NB
- Myristoylated alanine-rich C-kinase substrate,X-box-binding protein 1, luminal form
- Chain j
- Ribosomal protein L37
- Chain l
- eL39
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