HL_9NDP_027

3D structure

PDB id

9NDP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of stalled ribosome and nascent chain in complex with NMT2 and NAC

Experimental method

ELECTRON MICROSCOPY

Resolution

2.82 Å

Loop

Sequence

GCCGAAACGAUC

Length

12 nucleotides

Bulged bases

9NDP|1|5|C|1768

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9NDP|1|5|G|1761
9NDP|1|5|C|1762
9NDP|1|5|C|1763
9NDP|1|5|G|1764
9NDP|1|5|A|1765
9NDP|1|5|A|1766
9NDP|1|5|A|1767
9NDP|1|5|C|1768
9NDP|1|5|G|1769
9NDP|1|5|A|1770
9NDP|1|5|U|1771
9NDP|1|5|C|1772

Current chains

Chain 5

28S rRNA

Nearby chains

Chain II

uS13

Chain WW

uS19