HL_9NDP_090
3D structure
- PDB id
- 9NDP (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of stalled ribosome and nascent chain in complex with NMT2 and NAC
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.82 Å
Loop
- Sequence
- UCAGGG
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9NDP_090 not in the Motif Atlas
- Homologous match to HL_9PN5_085
- Geometric discrepancy: 0.229
- The information below is about HL_9PN5_085
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_34789.7
- Basepair signature
- cWW-F-F-F-F
- Number of instances in this motif group
- 456
Unit IDs
9NDP|1|K|U|416
9NDP|1|K|C|417
9NDP|1|K|A|418
9NDP|1|K|G|419
9NDP|1|K|G|420
9NDP|1|K|G|421
Current chains
- Chain K
- 18S rRNA
Nearby chains
- Chain DD
- Ribosomal protein S9 (Predicted)
- Chain EE
- Ribosomal protein S11
- Chain TT
- Ribosomal protein S15a
- Chain VV
- uS12
- Chain v
- Small ribosomal subunit protein uS5
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