HL_9NDP_113

3D structure

PDB id

9NDP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of stalled ribosome and nascent chain in complex with NMT2 and NAC

Experimental method

ELECTRON MICROSCOPY

Resolution

2.82 Å

Loop

Sequence

AUUGCAAUUAUU

Length

12 nucleotides

Bulged bases

9NDP|1|K|U|1621, 9NDP|1|K|U|1622, 9NDP|1|K|A|1623

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9NDP|1|K|A|1614
9NDP|1|K|U|1615
9NDP|1|K|U|1616
9NDP|1|K|G|1617
9NDP|1|K|C|1618
9NDP|1|K|A|1619
9NDP|1|K|A|1620
9NDP|1|K|U|1621
9NDP|1|K|U|1622
9NDP|1|K|A|1623
9NDP|1|K|U|1624
9NDP|1|K|U|1625

Current chains

Chain K

18S rRNA

Nearby chains

Chain 9

eS29

Chain II

uS13

Chain PP

eS19

Chain WW

uS19