HL_9NJV_004

3D structure

PDB id

9NJV (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S initiation complex (bL33 absent)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

UUAACUGAAUCCAUAGGUUA

Length

20 nucleotides

Bulged bases

9NJV|1|R1|C|163

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9NJV|1|R1|U|153
9NJV|1|R1|U|154
9NJV|1|R1|A|155
9NJV|1|R1|A|156
9NJV|1|R1|C|157
9NJV|1|R1|U|158
9NJV|1|R1|G|159
9NJV|1|R1|A|160
9NJV|1|R1|A|161
9NJV|1|R1|U|162
9NJV|1|R1|C|163
9NJV|1|R1|C|164
9NJV|1|R1|A|165
9NJV|1|R1|U|166
9NJV|1|R1|A|167
9NJV|1|R1|G|168
9NJV|1|R1|G|169
9NJV|1|R1|U|170
9NJV|1|R1|U|171
9NJV|1|R1|A|172

Current chains

Chain R1

23S ribosomal RNA

Nearby chains

Chain 28

50S ribosomal protein L28