HL_9NJV_023

3D structure

PDB id

9NJV (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S initiation complex (bL33 absent)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GCAAGGGGGUCAUCCCGACUUACCAACC

Length

28 nucleotides

Bulged bases

9NJV|1|R1|U|887

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9NJV|1|R1|G|875
9NJV|1|R1|C|876
9NJV|1|R1|A|877
9NJV|1|R1|A|878
9NJV|1|R1|G|879
9NJV|1|R1|G|880
9NJV|1|R1|G|881
9NJV|1|R1|G|882
9NJV|1|R1|G|883
9NJV|1|R1|U|884
9NJV|1|R1|C|885
9NJV|1|R1|A|886
9NJV|1|R1|U|887
9NJV|1|R1|C|888
9NJV|1|R1|C|889
9NJV|1|R1|C|890
9NJV|1|R1|G|891
9NJV|1|R1|A|892
9NJV|1|R1|C|893
9NJV|1|R1|U|894
9NJV|1|R1|U|895
9NJV|1|R1|A|896
9NJV|1|R1|C|897
9NJV|1|R1|C|898
9NJV|1|R1|A|899
9NJV|1|R1|A|900
9NJV|1|R1|C|901
9NJV|1|R1|C|902

Current chains

Chain R1

23S ribosomal RNA

Nearby chains

Chain 16

50S ribosomal protein L16

Chain sm

30S ribosomal protein S13

Chain ss

30S ribosomal protein S19