HL_9NJV_045

3D structure

PDB id

9NJV (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S initiation complex (bL33 absent)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GUAACUAUAAC

Length

11 nucleotides

Bulged bases

9NJV|1|R1|A|1913, 9NJV|1|R1|U|1915

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9NJV|1|R1|G|1910
9NJV|1|R1|U|1911
9NJV|1|R1|A|1912
9NJV|1|R1|A|1913
9NJV|1|R1|C|1914
9NJV|1|R1|U|1915
9NJV|1|R1|A|1916
9NJV|1|R1|U|1917
9NJV|1|R1|A|1918
9NJV|1|R1|A|1919
9NJV|1|R1|C|1920

Current chains

Chain R1

23S ribosomal RNA

Nearby chains

Chain R3

Small subunit ribosomal RNA; SSU rRNA

Chain T

Transfer RNA; tRNA