HL_9NJV_048

3D structure

PDB id

9NJV (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S initiation complex (bL33 absent)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

CUUUGAAGUGUGGACGCCAGUCUGCAUGGAG

Length

31 nucleotides

Bulged bases

9NJV|1|R1|U|2132, 9NJV|1|R1|C|2145, 9NJV|1|R1|A|2147

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9NJV|1|R1|C|2129
9NJV|1|R1|U|2130
9NJV|1|R1|U|2131
9NJV|1|R1|U|2132
9NJV|1|R1|G|2133
9NJV|1|R1|A|2134
9NJV|1|R1|A|2135
9NJV|1|R1|G|2136
9NJV|1|R1|U|2137
9NJV|1|R1|G|2138
9NJV|1|R1|U|2139
9NJV|1|R1|G|2140
9NJV|1|R1|G|2141
9NJV|1|R1|A|2142
9NJV|1|R1|C|2143
9NJV|1|R1|G|2144
9NJV|1|R1|C|2145
9NJV|1|R1|C|2146
9NJV|1|R1|A|2147
9NJV|1|R1|G|2148
9NJV|1|R1|U|2149
9NJV|1|R1|C|2150
9NJV|1|R1|U|2151
9NJV|1|R1|G|2152
9NJV|1|R1|C|2153
9NJV|1|R1|A|2154
9NJV|1|R1|U|2155
9NJV|1|R1|G|2156
9NJV|1|R1|G|2157
9NJV|1|R1|A|2158
9NJV|1|R1|G|2159

Current chains

Chain R1

23S ribosomal RNA

Nearby chains