HL_9NJV_077

3D structure

PDB id

9NJV (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S initiation complex (bL33 absent)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

CUACGG

Length

6 nucleotides

Bulged bases

9NJV|1|R3|A|344

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9NJV_077 not in the Motif Atlas

Homologous match to HL_6CZR_080

Geometric discrepancy: 0.1727

The information below is about HL_6CZR_080

Detailed Annotation

UNCG

Broad Annotation

No text annotation

Motif group

HL_34617.4

Basepair signature

cWW-tSW-F

Number of instances in this motif group

58

Unit IDs

9NJV|1|R3|C|342
9NJV|1|R3|U|343
9NJV|1|R3|A|344
9NJV|1|R3|C|345
9NJV|1|R3|G|346
9NJV|1|R3|G|347

Current chains

Chain R3

16S ribosomal RNA

Nearby chains

Chain 14

50S ribosomal protein L14

Chain 19

50S ribosomal protein L19