HL_9NL5_084
3D structure
- PDB id
- 9NL5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli pre-elongation complex without an A-site tRNA with EQ2-EttA in Hydrolytic 1 conformation
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- CGGUGAAAUG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9NL5_084 not in the Motif Atlas
- Homologous match to HL_5J7L_015
- Geometric discrepancy: 0.0774
- The information below is about HL_5J7L_015
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_75293.5
- Basepair signature
- cWW-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 11
Unit IDs
9NL5|1|R3|C|689
9NL5|1|R3|G|690
9NL5|1|R3|G|691
9NL5|1|R3|U|692
9NL5|1|R3|G|693
9NL5|1|R3|A|694
9NL5|1|R3|A|695
9NL5|1|R3|A|696
9NL5|1|R3|U|697
9NL5|1|R3|G|698
Current chains
- Chain R3
- 16S ribosomal RNA
Nearby chains
- Chain M
- mRNA
- Chain R1
- Large subunit ribosomal RNA; LSU rRNA
- Chain sg
- 30S ribosomal protein S7
- Chain sk
- Small ribosomal subunit protein uS11
- Chain su
- Small ribosomal subunit protein bS21
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