HL_9NLH_052
3D structure
- PDB id
- 9NLH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E.coli Initiation complex with YheS-EQ2
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- CUAAAGAGUAACG
- Length
- 13 nucleotides
- Bulged bases
- 9NLH|1|R1|A|2268, 9NLH|1|R1|C|2275
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9NLH_052 not in the Motif Atlas
- Homologous match to HL_5J7L_187
- Geometric discrepancy: 0.0765
- The information below is about HL_5J7L_187
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_91939.2
- Basepair signature
- cWW-tSH-tHH-tWW-F-F-F
- Number of instances in this motif group
- 8
Unit IDs
9NLH|1|R1|C|2264
9NLH|1|R1|U|2265
9NLH|1|R1|A|2266
9NLH|1|R1|A|2267
9NLH|1|R1|A|2268
9NLH|1|R1|G|2269
9NLH|1|R1|A|2270
9NLH|1|R1|G|2271
9NLH|1|R1|U|2272
9NLH|1|R1|A|2273
9NLH|1|R1|A|2274
9NLH|1|R1|C|2275
9NLH|1|R1|G|2276
Current chains
- Chain R1
- 23S ribosomal RNA
Nearby chains
- Chain 16
- 50S ribosomal protein L16
- Chain 27
- 50S ribosomal protein L27
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