HL_9NLH_102
3D structure
- PDB id
- 9NLH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E.coli Initiation complex with YheS-EQ2
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- G(4OC)UCAUAAC
- Length
- 9 nucleotides
- Bulged bases
- 9NLH|1|T|U|33
- QA status
- Modified nucleotides: 4OC
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9NLH_102 not in the Motif Atlas
- Homologous match to HL_6CFJ_107
- Geometric discrepancy: 0.1475
- The information below is about HL_6CFJ_107
- Detailed Annotation
- tRNA anticodon loop
- Broad Annotation
- Anticodon loop
- Motif group
- HL_81376.3
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 43
Unit IDs
9NLH|1|T|G|31
9NLH|1|T|4OC|32
9NLH|1|T|U|33
9NLH|1|T|C|34
9NLH|1|T|A|35
9NLH|1|T|U|36
9NLH|1|T|A|37
9NLH|1|T|A|38
9NLH|1|T|C|39
Current chains
- Chain T
- tRNA
Nearby chains
- Chain M
- mRNA
- Chain R3
- Small subunit ribosomal RNA; SSU rRNA
- Chain si
- Small ribosomal subunit protein uS9
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