HL_9NLJ_084
3D structure
- PDB id
- 9NLJ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E.coli Initiation complex with Uup-EQ2
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- CGGUGAAAUG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9NLJ_084 not in the Motif Atlas
- Homologous match to HL_4LFB_015
- Geometric discrepancy: 0.0934
- The information below is about HL_4LFB_015
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_38491.2
- Basepair signature
- cWW-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 12
Unit IDs
9NLJ|1|R3|C|689
9NLJ|1|R3|G|690
9NLJ|1|R3|G|691
9NLJ|1|R3|U|692
9NLJ|1|R3|G|693
9NLJ|1|R3|A|694
9NLJ|1|R3|A|695
9NLJ|1|R3|A|696
9NLJ|1|R3|U|697
9NLJ|1|R3|G|698
Current chains
- Chain R3
- 16S ribosomal RNA
Nearby chains
- Chain M
- mRNA
- Chain R1
- Large subunit ribosomal RNA; LSU rRNA
- Chain sg
- 30S ribosomal protein S7
- Chain sk
- Small ribosomal subunit protein uS11
- Chain su
- Small ribosomal subunit protein bS21
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