HL_9NLS_076
3D structure
- PDB id
- 9NLS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli initiation complex with EQ2-YbiT in Intermediate/PtIM(b) conformation
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.3 Å
Loop
- Sequence
- GGUAACGGC
- Length
- 9 nucleotides
- Bulged bases
- 9NLS|1|R3|G|266
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9NLS_076 not in the Motif Atlas
- Homologous match to HL_5J7L_006
- Geometric discrepancy: 0.0988
- The information below is about HL_5J7L_006
- Detailed Annotation
- GNRA related
- Broad Annotation
- GNRA related
- Motif group
- HL_84299.4
- Basepair signature
- cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 9
Unit IDs
9NLS|1|R3|G|259
9NLS|1|R3|G|260
9NLS|1|R3|U|261
9NLS|1|R3|A|262
9NLS|1|R3|A|263
9NLS|1|R3|C|264
9NLS|1|R3|G|265
9NLS|1|R3|G|266
9NLS|1|R3|C|267
Current chains
- Chain R3
- 16S ribosomal RNA
Nearby chains
- Chain sq
- Small ribosomal subunit protein uS17
- Chain st
- 30S ribosomal protein S20
Coloring options: