HL_9NO7_020
3D structure
- PDB id
- 9NO7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the wild-type Thermus thermophilus 70S ribosome in complex with mRNA, A-site Q230-N5-methylated Release Factor 1, and P-site 2'-deoxy-A76-fMEAAAKC-peptidyl-tRNAcys at 2.13A resolution
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.13 Å
Loop
- Sequence
- GGUGAGAC
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9NO7_020 not in the Motif Atlas
- Geometric match to HL_9DFE_020
- Geometric discrepancy: 0.0957
- The information below is about HL_9DFE_020
- Detailed Annotation
- GNRA wlth tandem sheared
- Broad Annotation
- No text annotation
- Motif group
- HL_98423.3
- Basepair signature
- cWW-tSH-F-F-F-F
- Number of instances in this motif group
- 15
Unit IDs
9NO7|1|A|G|712
9NO7|1|A|G|713
9NO7|1|A|U|714
9NO7|1|A|G|715
9NO7|1|A|A|716
9NO7|1|A|G|717
9NO7|1|A|A|718
9NO7|1|A|C|719
Current chains
- Chain A
- 23S Ribosomal RNA
Nearby chains
- Chain a
- Small subunit ribosomal RNA; SSU rRNA
- Chain o
- 30S ribosomal protein S15
- Chain q
- 30S ribosomal protein S17
Coloring options: