HL_9O2X_029

3D structure

PDB id

9O2X (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of WT E.coli ribosome 70S subunit with complexed with mRNA, P-site fMet-NH-tRNAfMet and A-site (S)-betahydroxyBocK charged NH-tRNAPyl

Experimental method

ELECTRON MICROSCOPY

Resolution

2.29 Å

Loop

Sequence

CUUCGG

Length

6 nucleotides

Bulged bases

9O2X|1|A|U|1451

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9O2X_029 not in the Motif Atlas

Geometric match to HL_4LFB_009

Geometric discrepancy: 0.1356

The information below is about HL_4LFB_009

Detailed Annotation

UNCG

Broad Annotation

No text annotation

Motif group

HL_61337.5

Basepair signature

cWW-tSW-F

Number of instances in this motif group

72

Unit IDs

9O2X|1|A|C|1449
9O2X|1|A|U|1450
9O2X|1|A|U|1451
9O2X|1|A|C|1452
9O2X|1|A|G|1453
9O2X|1|A|G|1454

Current chains

Chain A

16S rRNA

Nearby chains

Chain T

Small ribosomal subunit protein bS20