3D structure

PDB id
9O2X (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of WT E.coli ribosome 70S subunit with complexed with mRNA, P-site fMet-NH-tRNAfMet and A-site (S)-betahydroxyBocK charged NH-tRNAPyl
Experimental method
ELECTRON MICROSCOPY
Resolution
2.29 Å

Loop

Sequence
CUGAAAGCAUCUAAG
Length
15 nucleotides
Bulged bases
9O2X|1|a|G|2751, 9O2X|1|a|C|2755
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9O2X|1|a|C|2745
9O2X|1|a|U|2746
9O2X|1|a|G|2747
9O2X|1|a|A|2748
9O2X|1|a|A|2749
9O2X|1|a|A|2750
9O2X|1|a|G|2751
9O2X|1|a|C|2752
9O2X|1|a|A|2753
9O2X|1|a|U|2754
9O2X|1|a|C|2755
9O2X|1|a|U|2756
9O2X|1|a|A|2757
9O2X|1|a|A|2758
9O2X|1|a|G|2759

Current chains

Chain a
23S rRNA

Nearby chains

Chain 3
50S ribosomal protein L36
Chain g
Large ribosomal subunit protein uL6
Chain i
Large ribosomal subunit protein uL13

Coloring options:

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