HL_9O3K_205
3D structure
- PDB id
- 9O3K (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with macrolide erythromycin, mRNA, aminoacylated A-site Lys-tRNAlys, P-site fMAC-peptidyl-tRNAmet, and deacylated E-site tRNAlys at 2.70A resolution
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.7 Å
Loop
- Sequence
- ACU(U8U)UU(T6A)A(PSU)
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Modified nucleotides: U8U, T6A, PSU
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9O3K_205 not in the Motif Atlas
- Geometric match to HL_7U2I_104
- Geometric discrepancy: 0.1413
- The information below is about HL_7U2I_104
- Detailed Annotation
- tRNA anticodon loop
- Broad Annotation
- Anticodon loop
- Motif group
- HL_06059.7
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 51
Unit IDs
9O3K|1|2w|A|31
9O3K|1|2w|C|32
9O3K|1|2w|U|33
9O3K|1|2w|U8U|34
9O3K|1|2w|U|35
9O3K|1|2w|U|36
9O3K|1|2w|T6A|37
9O3K|1|2w|A|38
9O3K|1|2w|PSU|39
Current chains
- Chain 2w
- A-site Aminoacyl-tRNA Lys-tRNAlys
Nearby chains
- Chain 2A
- Large subunit ribosomal RNA; LSU rRNA
- Chain 2a
- Small subunit ribosomal RNA; SSU rRNA
- Chain 2l
- 30S ribosomal protein S12
- Chain 2m
- 30S ribosomal protein S13
- Chain 2v
- MET-LYS-mRNA
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