HL_9O3W_058

3D structure

PDB id

9O3W (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human 80S ribosome bound to IDB-001 stalled on MYC nascent chain

Experimental method

ELECTRON MICROSCOPY

Resolution

1.9 Å

Loop

Sequence

UUCAG(OMU)ACG

Length

9 nucleotides

Bulged bases

None detected

QA status

Modified nucleotides: OMU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9O3W|1|L5|U|4301
9O3W|1|L5|U|4302
9O3W|1|L5|C|4303
9O3W|1|L5|A|4304
9O3W|1|L5|G|4305
9O3W|1|L5|OMU|4306
9O3W|1|L5|A|4307
9O3W|1|L5|C|4308
9O3W|1|L5|G|4309

Current chains

Chain L5

28S rRNA

Nearby chains

Chain LQ

Large ribosomal subunit protein eL18

Chain LT

Large ribosomal subunit protein eL21

Chain La

60S ribosomal protein L27a

Chain Lb

Large ribosomal subunit protein eL29

Chain Lo

Large ribosomal subunit protein eL42