HL_9O3W_086

3D structure

PDB id

9O3W (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human 80S ribosome bound to IDB-001 stalled on MYC nascent chain

Experimental method

ELECTRON MICROSCOPY

Resolution

1.9 Å

Loop

Sequence

GUCGCCGUGCC

Length

11 nucleotides

Bulged bases

9O3W|1|S2|G|385

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9O3W|1|S2|G|377
9O3W|1|S2|U|378
9O3W|1|S2|C|379
9O3W|1|S2|G|380
9O3W|1|S2|C|381
9O3W|1|S2|C|382
9O3W|1|S2|G|383
9O3W|1|S2|U|384
9O3W|1|S2|G|385
9O3W|1|S2|C|386
9O3W|1|S2|C|387

Current chains

Chain S2

18S rRNA

Nearby chains

Chain SI

Small ribosomal subunit protein eS8

Chain SL

Small ribosomal subunit protein uS17