HL_9OFV_034

3D structure

PDB id

9OFV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Consensus reconstruction of the eukaryotic Ribosome-associated Quality Control complex

Experimental method

ELECTRON MICROSCOPY

Resolution

3.16 Å

Loop

Sequence

CCUGAUUUUAUGCAGG

Length

16 nucleotides

Bulged bases

9OFV|1|f|U|1569

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9OFV|1|f|C|1562
9OFV|1|f|C|1563
9OFV|1|f|U|1564
9OFV|1|f|G|1565
9OFV|1|f|A|1566
9OFV|1|f|U|1567
9OFV|1|f|U|1568
9OFV|1|f|U|1569
9OFV|1|f|U|1570
9OFV|1|f|A|1571
9OFV|1|f|U|1572
9OFV|1|f|G|1573
9OFV|1|f|C|1574
9OFV|1|f|A|1575
9OFV|1|f|G|1576
9OFV|1|f|G|1577

Current chains

Chain f

25S rRNA

Nearby chains

Chain b0

60S ribosomal protein L25

Chain d

60S ribosomal protein L41-A

Chain i

5.8S ribosomal RNA; 5.8S rRNA