HL_9OFV_070

3D structure

PDB id

9OFV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Consensus reconstruction of the eukaryotic Ribosome-associated Quality Control complex

Experimental method

ELECTRON MICROSCOPY

Resolution

3.16 Å

Loop

Sequence

CUUG

Length

4 nucleotides

Bulged bases

9OFV|1|f|U|3351

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9OFV_070 not in the Motif Atlas

Geometric match to HL_8KAJ_001

Geometric discrepancy: 0.1458

The information below is about HL_8KAJ_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_90436.3

Basepair signature

cWW-F

Number of instances in this motif group

46

Unit IDs

9OFV|1|f|C|3350
9OFV|1|f|U|3351
9OFV|1|f|U|3352
9OFV|1|f|G|3353

Current chains

Chain f

25S rRNA

Nearby chains