HL_9OJM_010
3D structure
- PDB id
- 9OJM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human mitochondrial 28S PIC with tRNA and mtIF2
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.5 Å
Loop
- Sequence
- CGAAAG
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9OJM_010 not in the Motif Atlas
- Homologous match to HL_6CZR_081
- Geometric discrepancy: 0.2837
- The information below is about HL_6CZR_081
- Detailed Annotation
- GNRA
- Broad Annotation
- No text annotation
- Motif group
- HL_37824.6
- Basepair signature
- cWW-F-F-F-F
- Number of instances in this motif group
- 360
Unit IDs
9OJM|1|A|C|842
9OJM|1|A|G|843
9OJM|1|A|A|844
9OJM|1|A|A|845
9OJM|1|A|A|846
9OJM|1|A|G|847
Current chains
- Chain A
- 12S mitochondrial RNA
Nearby chains
- Chain 0
- Small ribosomal subunit protein mS34
- Chain M
- Small ribosomal subunit protein bS16m
- Chain O
- 28S ribosomal protein S18b, mitochondrial
- Chain U
- Small ribosomal subunit protein mS26
Coloring options: