HL_9OJM_012
3D structure
- PDB id
- 9OJM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human mitochondrial 28S PIC with tRNA and mtIF2
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.5 Å
Loop
- Sequence
- UUGUAAAAAA
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9OJM_012 not in the Motif Atlas
- Geometric match to HL_8B0X_014
- Geometric discrepancy: 0.2276
- The information below is about HL_8B0X_014
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_38491.4
- Basepair signature
- cWW-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 14
Unit IDs
9OJM|1|A|U|989
9OJM|1|A|U|990
9OJM|1|A|G|991
9OJM|1|A|U|992
9OJM|1|A|A|993
9OJM|1|A|A|994
9OJM|1|A|A|995
9OJM|1|A|A|996
9OJM|1|A|A|997
9OJM|1|A|A|998
Current chains
- Chain A
- 12S mitochondrial RNA
Nearby chains
- Chain F
- 28S ribosomal protein S7, mitochondrial
- Chain I
- Small ribosomal subunit protein uS11m
- Chain Q
- 28S ribosomal protein S21, mitochondrial
Coloring options: