HL_9OJM_024
3D structure
- PDB id
- 9OJM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human mitochondrial 28S PIC with tRNA and mtIF2
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.5 Å
Loop
- Sequence
- UGG(MA6)(MA6)A
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Modified nucleotides: MA6
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9OJM_024 not in the Motif Atlas
- Homologous match to HL_6CZR_103
- Geometric discrepancy: 0.1687
- The information below is about HL_6CZR_103
- Detailed Annotation
- GNRA
- Broad Annotation
- No text annotation
- Motif group
- HL_37824.6
- Basepair signature
- cWW-F-F-F-F
- Number of instances in this motif group
- 360
Unit IDs
9OJM|1|A|U|1580
9OJM|1|A|G|1581
9OJM|1|A|G|1582
9OJM|1|A|MA6|1583
9OJM|1|A|MA6|1584
9OJM|1|A|A|1585
Current chains
- Chain A
- 12S mitochondrial RNA
Nearby chains
- Chain 3
- Small ribosomal subunit protein mS38
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