HL_9P78_032

3D structure

PDB id

9P78 (explore in PDB, NAKB, or RNA 3D Hub)

Description

In situ human Hibernating rotate 3 with E-site tRNA state 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

UGUAACAA

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9P78|1|L5|U|2006
9P78|1|L5|G|2007
9P78|1|L5|U|2008
9P78|1|L5|A|2009
9P78|1|L5|A|2010
9P78|1|L5|C|2011
9P78|1|L5|A|2012
9P78|1|L5|A|2013

Current chains

Chain L5

28S rRNA

Nearby chains

Chain CB

Elongation factor 2

Chain Lm

Large ribosomal subunit protein eL40

Chain Ls

60S acidic ribosomal protein P0

Chain Lt

Large ribosomal subunit protein uL11