HL_9P78_054

3D structure

PDB id

9P78 (explore in PDB, NAKB, or RNA 3D Hub)

Description

In situ human Hibernating rotate 3 with E-site tRNA state 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GUAACUAUGAC

Length

11 nucleotides

Bulged bases

9P78|1|L5|A|3760

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9P78|1|L5|G|3757
9P78|1|L5|U|3758
9P78|1|L5|A|3759
9P78|1|L5|A|3760
9P78|1|L5|C|3761
9P78|1|L5|U|3762
9P78|1|L5|A|3763
9P78|1|L5|U|3764
9P78|1|L5|G|3765
9P78|1|L5|A|3766
9P78|1|L5|C|3767

Current chains

Chain L5

28S rRNA

Nearby chains

Chain CB

Elongation factor 2

Chain S2

Small subunit ribosomal RNA; SSU rRNA