HL_9P7E_098

3D structure

PDB id

9P7E (explore in PDB, NAKB, or RNA 3D Hub)

Description

In situ human Hibernating class5 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.59 Å

Loop

Sequence

UGUUCAAAG

Length

9 nucleotides

Bulged bases

9P7E|1|S2|G|821

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9P7E|1|S2|U|820
9P7E|1|S2|G|821
9P7E|1|S2|U|822
9P7E|1|S2|U|823
9P7E|1|S2|C|824
9P7E|1|S2|A|825
9P7E|1|S2|A|826
9P7E|1|S2|A|827
9P7E|1|S2|G|828

Current chains

Chain S2

18S rRNA

Nearby chains

Chain SE

Small ribosomal subunit protein eS4, X isoform

Chain SJ

40S ribosomal protein S9

Chain SY

40S ribosomal protein S24