HL_9P7I_107

3D structure

PDB id

9P7I (explore in PDB, NAKB, or RNA 3D Hub)

Description

In situ HHT and CHX treated human eEF1A-A/T-P-Z state 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.69 Å

Loop

Sequence

UCUCGGCCGGGGCCCGAA

Length

18 nucleotides

Bulged bases

9P7I|1|S2|G|751, 9P7I|1|S2|G|752, 9P7I|1|S2|C|753, 9P7I|1|S2|C|785, 9P7I|1|S2|G|786, 9P7I|1|S2|G|787, 9P7I|1|S2|G|788, 9P7I|1|S2|G|789, 9P7I|1|S2|C|790, 9P7I|1|S2|C|791, 9P7I|1|S2|C|792, 9P7I|1|S2|G|793

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9P7I|1|S2|U|747
9P7I|1|S2|C|748
9P7I|1|S2|U|749
9P7I|1|S2|C|750
9P7I|1|S2|G|751
9P7I|1|S2|G|752
9P7I|1|S2|C|753
9P7I|1|S2|C|785
9P7I|1|S2|G|786
9P7I|1|S2|G|787
9P7I|1|S2|G|788
9P7I|1|S2|G|789
9P7I|1|S2|C|790
9P7I|1|S2|C|791
9P7I|1|S2|C|792
9P7I|1|S2|G|793
9P7I|1|S2|A|794
9P7I|1|S2|A|795

Current chains

Chain S2

18S rRNA [Homo sapiens]

Nearby chains

Chain SE

Small ribosomal subunit protein eS4, X isoform

Chain SG

40S ribosomal protein S6

Chain SH

Small ribosomal subunit protein eS7