HL_9P7J_020

3D structure

PDB id

9P7J (explore in PDB, NAKB, or RNA 3D Hub)

Description

In situ HHT and CHX treated human P state 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.91 Å

Loop

Sequence

CCUCUCCAGUCCG

Length

13 nucleotides

Bulged bases

9P7J|1|L5|C|1442, 9P7J|1|L5|U|1445

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9P7J|1|L5|C|1436
9P7J|1|L5|C|1437
9P7J|1|L5|U|1438
9P7J|1|L5|C|1439
9P7J|1|L5|U|1440
9P7J|1|L5|C|1441
9P7J|1|L5|C|1442
9P7J|1|L5|A|1443
9P7J|1|L5|G|1444
9P7J|1|L5|U|1445
9P7J|1|L5|C|1446
9P7J|1|L5|C|1447
9P7J|1|L5|G|1448

Current chains

Chain L5

28S rRNA [Homo sapiens]

Nearby chains

Chain LC

60S ribosomal protein L4

Chain LF

60S ribosomal protein L7

Chain LQ

60S ribosomal protein L18

Chain Lb

Large ribosomal subunit protein eL29