HL_9P7K_102
3D structure
- PDB id
- 9P7K (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- In situ human post eEF1A-A/T-P-E state 80S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.8 Å
Loop
- Sequence
- GUCGCCGUGCC
- Length
- 11 nucleotides
- Bulged bases
- 9P7K|1|S2|G|385
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9P7K_102 not in the Motif Atlas
- Geometric match to HL_8GLP_091
- Geometric discrepancy: 0.1074
- The information below is about HL_8GLP_091
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_50525.1
- Basepair signature
- cWW-cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 3
Unit IDs
9P7K|1|S2|G|377
9P7K|1|S2|U|378
9P7K|1|S2|C|379
9P7K|1|S2|G|380
9P7K|1|S2|C|381
9P7K|1|S2|C|382
9P7K|1|S2|G|383
9P7K|1|S2|U|384
9P7K|1|S2|G|385
9P7K|1|S2|C|386
9P7K|1|S2|C|387
Current chains
- Chain S2
- 18S rRNA
Nearby chains
- Chain SI
- 40S ribosomal protein S8
- Chain SL
- 40S ribosomal protein S11
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