HL_9P7X_036
3D structure
- PDB id
- 9P7X (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- In situ human A-P-Z state 80S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.83 Å
Loop
- Sequence
- CCGCG
- Length
- 5 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9P7X_036 not in the Motif Atlas
- Geometric match to HL_8GLP_031
- Geometric discrepancy: 0.1675
- The information below is about HL_8GLP_031
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_12111.1
- Basepair signature
- cWW-F-F-F
- Number of instances in this motif group
- 4
Unit IDs
9P7X|1|L5|C|2257
9P7X|1|L5|C|2258
9P7X|1|L5|G|2259
9P7X|1|L5|C|2260
9P7X|1|L5|G|2261
Current chains
- Chain L5
- 28S rRNA
Nearby chains
- Chain LE
- Large ribosomal subunit protein eL6
- Chain LF
- 60S ribosomal protein L7
- Chain Lr
- 60S ribosomal protein L28
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