HL_9P8B_114
3D structure
- PDB id
- 9P8B (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- In situ human eEF1A-A/T-P-E state 80S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.48 Å
Loop
- Sequence
- AGGUGAAAU(PSU)
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Modified nucleotides: PSU
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9P8B|1|S2|A|957
9P8B|1|S2|G|958
9P8B|1|S2|G|959
9P8B|1|S2|U|960
9P8B|1|S2|G|961
9P8B|1|S2|A|962
9P8B|1|S2|A|963
9P8B|1|S2|A|964
9P8B|1|S2|U|965
9P8B|1|S2|PSU|966
Current chains
- Chain S2
- 18S rRNA
Nearby chains
- Chain Et
- Transfer RNA; tRNA
- Chain L5
- Large subunit ribosomal RNA; LSU rRNA
- Chain SF
- 40S ribosomal protein S5
- Chain SO
- Small ribosomal subunit protein uS11
Coloring options: