HL_9P8I_123
3D structure
- PDB id
- 9P8I (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- In situ HHT and CHX treated human P-Z state 80S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.89 Å
Loop
- Sequence
- CGGGGUCGGCCCACGGCCCUGG
- Length
- 22 nucleotides
- Bulged bases
- 9P8I|1|S2|G|1760, 9P8I|1|S2|C|1762, 9P8I|1|S2|G|1763, 9P8I|1|S2|G|1764, 9P8I|1|S2|C|1765, 9P8I|1|S2|C|1766, 9P8I|1|S2|C|1767, 9P8I|1|S2|A|1768, 9P8I|1|S2|C|1769, 9P8I|1|S2|G|1770, 9P8I|1|S2|G|1771, 9P8I|1|S2|C|1774
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9P8I|1|S2|C|1756
9P8I|1|S2|G|1757
9P8I|1|S2|G|1758
9P8I|1|S2|G|1759
9P8I|1|S2|G|1760
9P8I|1|S2|U|1761
9P8I|1|S2|C|1762
9P8I|1|S2|G|1763
9P8I|1|S2|G|1764
9P8I|1|S2|C|1765
9P8I|1|S2|C|1766
9P8I|1|S2|C|1767
9P8I|1|S2|A|1768
9P8I|1|S2|C|1769
9P8I|1|S2|G|1770
9P8I|1|S2|G|1771
9P8I|1|S2|C|1772
9P8I|1|S2|C|1773
9P8I|1|S2|C|1774
9P8I|1|S2|U|1775
9P8I|1|S2|G|1776
9P8I|1|S2|G|1777
Current chains
- Chain S2
- 18S rRNA [Homo sapiens]
Nearby chains
- Chain LW
- Ribosomal protein L24
- Chain SG
- 40S ribosomal protein S6
Coloring options: