HL_9PG8_015
3D structure
- PDB id
- 9PG8 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- In situ structure of the human mitoribosome in the P-E state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.06 Å
Loop
- Sequence
- CGUUCAAG
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9PG8_015 not in the Motif Atlas
- Homologous match to HL_6PRV_002
- Geometric discrepancy: 0.1359
- The information below is about HL_6PRV_002
- Detailed Annotation
- GNRA with tandem sheared
- Broad Annotation
- No text annotation
- Motif group
- HL_98423.4
- Basepair signature
- cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 16
Unit IDs
9PG8|1|A|C|2202
9PG8|1|A|G|2203
9PG8|1|A|U|2204
9PG8|1|A|U|2205
9PG8|1|A|C|2206
9PG8|1|A|A|2207
9PG8|1|A|A|2208
9PG8|1|A|G|2209
Current chains
- Chain A
- 16S mitochondrial rRNA
Nearby chains
- Chain C
- Translational activator of cytochrome c oxidase 1
- Chain J
- 39S ribosomal protein L11, mitochondrial
- Chain l
- 39S ribosomal protein L54, mitochondrial
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